Plot FigR heatmap — plotfigRHeatmap • FigR

Heatmap visualization of TF-DORC associations based on the regulation scores inferred by FigR

Usage

plotfigRHeatmap(figR.d, score.cut = 1, DORCs = NULL, TFs = NULL, ...)

Arguments

figR.d: data.frame of results returned by runFigRGRN).
score.cut: numeric specifying the absolute regulation score to threshold TF-DORC connections on. Default is 1
DORCs: character specifying valid DORC gene symbols to subset heatmap to. Default is NULL (no subsetting)
TFs: character specifying valid TF gene symbols to subset heatmap to. Default is NULL (no subsetting)
...: additional parameters passed to the Heatmap)

Value

a TF-DORC filtered Heatmap generatd using Heatmap)

Author

Vinay Kartha